Issues

• [BUG] Imaging sync gives a span to trials only partly covered by imaging

  BrainCOGS/U19-pipeline-python#177 · Filter by author tabedzki opened on Oct 26, 2026
  

• Recurring schedule rules: tables, migration, nightly materializer

  enhancement
  BrainCOGS/U19-pipeline-python#144 · Filter by author tabedzki opened on Oct 2, 2026

• Track upstream neuroconv zarr 3 support; drop the zarr<3 pin when it ships

  dependencies
  BrainCOGS/U19-pipeline-python#129 · Filter by author tabedzki opened on Sep 25, 2026

• Complete suite2p 1.x migration: pin version, fix legacy param conversion, update loaders for 1.x output layout

  BrainCOGS/U19-pipeline-python#128 · Filter by author tabedzki opened on Sep 23, 2026
  1

• Wire imaging (behavior-clock synced) into the NWB export handler

  BrainCOGS/U19-pipeline-python#111 · Filter by author tabedzki opened on Aug 26, 2026
  4

• Assessment: migrate orchestration layer to Apache Airflow

  BrainCOGS/U19-pipeline-python#95 · Filter by author tabedzki opened on Jun 23, 2026
  2

• Enable DREDge preprocessing via DataJoint param inserts (no code change)

  BrainCOGS/U19-pipeline-python#94 · Filter by author tabedzki opened on Jun 22, 2026

• switch to uv from conda

  BrainCOGS/U19-pipeline-python#54 · Filter by author tabedzki opened on Nov 26, 2025
  5

  

• Use UV instead of conda in projects (Automation Pipeline, RecordingProcessJobGUI, WaterPubsGUI, U19_pipeline_python)

  BrainCOGS/U19-pipeline-python#53 · Filter by author tabedzki opened on Nov 26, 2025
  1

  

• Create script to ingest DB backups and create new test DB Schemas on a regular basis

  BrainCOGS/U19-pipeline-python#50 · Filter by author tabedzki opened on Oct 20, 2025

• brainstorming on upgrading ephys pipeline to latest version (0.4*)

  BrainCOGS/U19-pipeline-python#48 · Filter by author ttngu207 opened on Jun 3, 2025

• Introduce logging python feature into the pipeline

  BrainCOGS/U19-pipeline-python#45 · Filter by author tabedzki opened on Sep 13, 2024