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textbook

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Repository for Nipraxis course textbook

textbook.nipraxis.org

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Name		Name	Last commit message	Last commit date
.github/workflows		.github/workflows
_scripts		_scripts
bib		bib
code		code
data		data
images		images
scripts		scripts
.codespellrc		.codespellrc
.gitignore		.gitignore
CNAME		CNAME
Makefile		Makefile
_config.yml		_config.yml
_toc.yml		_toc.yml
_todo.md		_todo.md
allclose.Rmd		allclose.Rmd
anterior_cingulate.md		anterior_cingulate.md
arange.Rmd		arange.Rmd
array_reductions.Rmd		array_reductions.Rmd
arrays_3d.Rmd		arrays_3d.Rmd
arrays_and_images.Rmd		arrays_and_images.Rmd
assert.Rmd		assert.Rmd
bibliography.md		bibliography.md
bonferroni_correction.Rmd		bonferroni_correction.Rmd
boolean_arrays.Rmd		boolean_arrays.Rmd
boolean_indexing.Rmd		boolean_indexing.Rmd
boolean_indexing_nd.Rmd		boolean_indexing_nd.Rmd
brisk_python.Rmd		brisk_python.Rmd
build_requirements.txt		build_requirements.txt
check_install.py		check_install.py
choosing_editor.md		choosing_editor.md
classes.md		classes.md
classes_and_labs.md		classes_and_labs.md
coding_style.md		coding_style.md
comparing_arrays.Rmd		comparing_arrays.Rmd
comparing_floats.md		comparing_floats.md
convolution_background.Rmd		convolution_background.Rmd
convolution_matrices.Rmd		convolution_matrices.Rmd
diag_inverse.md		diag_inverse.md
diagonal_zooms.Rmd		diagonal_zooms.Rmd
dipy_registration.Rmd		dipy_registration.Rmd
dipy_registration.py		dipy_registration.py
docstrings.Rmd		docstrings.Rmd
dot_and_outer.md		dot_and_outer.md
dot_outer.Rmd		dot_outer.Rmd
dunders.Rmd		dunders.Rmd
example_data.md		example_data.md
exercises.md		exercises.md
floating_in_text.Rmd		floating_in_text.Rmd
full_scripting.md		full_scripting.md
git_videos.md		git_videos.md
git_walk_through.Rmd		git_walk_through.Rmd
git_workflow_exercises.md		git_workflow_exercises.md
github_dummies_homework.md		github_dummies_homework.md
github_glm_homework.md		github_glm_homework.md
github_pca_homework.md		github_pca_homework.md
glm_intro.Rmd		glm_intro.Rmd
glossary.md		glossary.md
hypothesis_tests.Rmd		hypothesis_tests.Rmd
image_header_and_affine.Rmd		image_header_and_affine.Rmd
images_3d.Rmd		images_3d.Rmd
images_and_affines.Rmd		images_and_affines.Rmd
images_and_memory.Rmd		images_and_memory.Rmd
index_reshape.Rmd		index_reshape.Rmd
installation.md		installation.md
installation_on_linux.md		installation_on_linux.md
installation_on_mac.md		installation_on_mac.md
installation_on_windows.md		installation_on_windows.md
intro.md		intro.md
intro_to_4d.Rmd		intro_to_4d.Rmd
introducing_nipype.Rmd		introducing_nipype.Rmd
introducing_python.Rmd		introducing_python.Rmd
keyword_arguments.Rmd		keyword_arguments.Rmd
length_one_tuples.Rmd		length_one_tuples.Rmd
list_comprehensions.Rmd		list_comprehensions.Rmd
logistics.md		logistics.md
map_coordinates.Rmd		map_coordinates.Rmd
matrix_rank.Rmd		matrix_rank.Rmd
mean_test_example.Rmd		mean_test_example.Rmd
mentors.md		mentors.md
methods_vs_functions.Rmd		methods_vs_functions.Rmd
model_one_voxel.Rmd		model_one_voxel.Rmd
module_directories.Rmd		module_directories.Rmd
more_on_jupyter.Rmd		more_on_jupyter.Rmd
multi_model_homework.md		multi_model_homework.md
multi_multiply.Rmd		multi_multiply.Rmd
my_script.py		my_script.py
mymodule.py		mymodule.py
nans.Rmd		nans.Rmd
newaxis.Rmd		newaxis.Rmd
nibabel_affines.Rmd		nibabel_affines.Rmd
nibabel_apply_affine.Rmd		nibabel_apply_affine.Rmd
nibabel_images.Rmd		nibabel_images.Rmd
nipype_ds114_sub009_t2r1.py		nipype_ds114_sub009_t2r1.py
nipype_settings.py		nipype_settings.py
non_tr_onsets.Rmd		non_tr_onsets.Rmd
numpy_diag.Rmd		numpy_diag.Rmd
numpy_intro.Rmd		numpy_intro.Rmd
numpy_logical.Rmd		numpy_logical.Rmd
numpy_meshgrid.Rmd		numpy_meshgrid.Rmd
numpy_random.Rmd		numpy_random.Rmd