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Change residue level MOI calculation to all atom - #442

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ioanaapapa wants to merge 7 commits into
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441-all-atom-MOI
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Change residue level MOI calculation to all atom#442
ioanaapapa wants to merge 7 commits into
mainfrom
441-all-atom-MOI

all atom moi; consistent naming between moi and moment_of_inertia

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